Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904799.1_cds_XP_016454930.1_48906
CDS Infomation

[gene=LOC107779099] [db_xref=GeneID:107779099] [protein=signal peptide peptidase-like 5] [protein_id=XP_016454930.1] [location=join(33300..33434,35179..35337,36425..36536,36638..36757,37976..38097,38860..39030,40961..40995,41089..41245,41473..41526,41637..41729,42436..42578,43051..43121,43994..44077,44152..44270)] [gbkey=CDS]
Sequence

ATGGCATTTTCTTCATTGCATTTTGATTATGGACAAGTGAGCCTTTTTATTCTGATTTTA
TCATCATCAATAATATCAGCATATGCTGCCCCTACTACCAATGTTCATAGCTCCTGCAGC
AATGATATCAATACGATTCTGGTGAAGTTGTGGGTTAATGGTGCTGAGAAAGATTCAATA
GTTGGCTTGAGTGCAGCATTTGGATCTGTATTACCCACTGATACTAAACATGCCCCCAGA
TTGCCTGCTGTTTATACTCAACCGTCAAATAGCTGTTCTGCTTCCTCCACCAAGTTATCA
GGCTCTATTGCACTAGCTCGTCGCGGTGAATGTGATTTTCTAATCAAGGCTACGGTTGCC
CAAGCAGGAGGTGCATCAGGTGTTGTGCTAATAAATACTGAAGGAGGTGCTCTGGAGATT
GCTTGTCCTAACAATTCTACCATATCTAATGTAACCGTTCCTGTCGTTTCAATTTCAAAT
GATGGGGGAGATATTATTGATAAATACATAGCTGCAGGAAAGAAAGTGGAGCTGCTGTTA
TATTCGCCAGATCGCCCTATTGTGGACTACTCAGTGTCGTTCATATGGTTGATGGCTGTT
GGAACAATTATTTGTGCAGCTCTTTGGAAAAGATTTACTCAATCTAAGGATGACGATGTA
GTAGCCAAGGAGGATGATGATGAAATTCTGCACATTACTGCATGGACTGCTATTGGGTTT
GTCATCTCAGCATCCACATTTCTGGTGCTACTTTACTTTTTCATGTCGACATGGTTTGTC
TGGCTGCTGATAATACTTTTCTGTATCGGTGGAATTGAGGGACTGCATAACTGCATAGTG
TCGCTCATACTAAGCAAATGTCGATGTTGTGGAAAGAAAACACTGAATTTGCCACTTCTT
GGGGAGGTCACTATTCTGTCTCTAGTTGTCCTACTACTTTGTGTGGCGTTCGCCATCTTC
TGGGCAGTAAACAGGAAAGAATCATACTCTTGGATTGGTCAAGACATTCTTGGAATTGCT
TTGATGATCACTGTTCTGCAGTTGGCTCAGTTGCCTAATATAAAGGTCGCTACAGTGCTT
CTGTGTTGCGCATTTGTCTATGACATCTTCTGGGTTTTCCTATCTCCCACTATATTCCAT
GATAGTGTTATGATTTCAGTTGCTAAAGGTAAGAAAGCTGGTGGAGAATCAATCCCGATG
CTTCTGAGAGTTCCTAAAGTAACAGATCCTTATAGTGGCTTTGATATGCTTGGCTTTGGG
GATATTCTCTTCCCTGGTCTGCTAATTTGCTTTACATACAGATTTGACGAAGCTAGAAAG
AAGGGAGTACTAAATGGATACTTCCTTTGGCTGATGATTGGTTACGGGACCGGTCTTTGC
TTGACTTACTTGGGCTTGTATTTAATGAAGGGACATGGTCAACCCGCTCTCCTATATCTC
GTGCCATGCACACTAGGAACTTGTTTGGTACTGGGTTTGGTGAGACGCGAACTGAAAGAC
CTTTGGAACAATAGCGATGTATCAAAACAAATGGCTGAAGAACGTCTGGGAAGCACACGT
CTTGGAAGCGCTTGA

Peptide Sequence

PEP ID

XP_016454930.1
PEP Infomation

PREDICTED: signal peptide peptidase-like 5 [Nicotiana tabacum]
Sequence

MAFSSLHFDYGQVSLFILILSSSIISAYAAPTTNVHSSCSNDINTILVKLWVNGAEKDSI
VGLSAAFGSVLPTDTKHAPRLPAVYTQPSNSCSASSTKLSGSIALARRGECDFLIKATVA
QAGGASGVVLINTEGGALEIACPNNSTISNVTVPVVSISNDGGDIIDKYIAAGKKVELLL
YSPDRPIVDYSVSFIWLMAVGTIICAALWKRFTQSKDDDVVAKEDDDEILHITAWTAIGF
VISASTFLVLLYFFMSTWFVWLLIILFCIGGIEGLHNCIVSLILSKCRCCGKKTLNLPLL
GEVTILSLVVLLLCVAFAIFWAVNRKESYSWIGQDILGIALMITVLQLAQLPNIKVATVL
LCCAFVYDIFWVFLSPTIFHDSVMISVAKGKKAGGESIPMLLRVPKVTDPYSGFDMLGFG
DILFPGLLICFTYRFDEARKKGVLNGYFLWLMIGYGTGLCLTYLGLYLMKGHGQPALLYL
VPCTLGTCLVLGLVRRELKDLWNNSDVSKQMAEERLGSTRLGSA

Transcript Sequence

Gene sequence data has not been registered.